SFB 1032: Nanoagents for Spatiotemporal Control of Molecular and Cellular Reactions
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Publications Area B

B01

"Guiding 3D cell migration in deformed synthetic hydrogel microstructures"
Authors: Miriam Dietrich, Hugo Le Roy, David B. Brückner, Hanna Engelke (B11), Roman Zantl, Joachim O. Rädler and Chase P. Broedersz (B12).
Royal Society of Chemistry, 2018

"Systemic Delivery of Folate-PEG siRNA Lipopolyplexes with Enhanced Intracellular Stability for In Vivo Gene Silencing in Leukemia"
Authors: Lee DJ, Kessel E, Lehto T, Liu X, Yoshinaga N, Padari K, Chen YC, Kempter S, Uchida S, Rädler JO, Pooga M, Sheu MT, Kataoka K, Wagner E (B04).
Bioconjug Chem.; 28(9):2393-2409, doi: 10.1021/acs.bioconjchem.7b00383, 2017 Sep 20

"Shape and inter-helical spacing of DNA origami nanostructures studied by small angle X-ray scattering"
Authors: S. Fischer, C. Hartl, K. Frank, J. Rädler, T. Liedl (A06), B. Nickel (A07)
Nano Letters 16, (2016) 16 (7), pp 4282–4287, DOI: 10.1021/acs.nanolett.6b01335

"Ring-Shaped Microlanes and Chemical Barriers as a Platform for Probing Single-Cell Migration."
Authors: Christoph Schreiber, Felix J. Segerer, Ernst Wagner (B04), Andreas Roidl & J. O. Rädler.
Scientific Reports 6, Article number: 26858 (2016), doi:10.1038/srep26858, Published online:
31 May 2016

"Versatile method to generate multiple types of micropatterns"
Authors: Segerer FJ, Röttgermann PJ, Schuster S, Piera Alberola A, Zahler S (B08) and Rädler J.O.
Biointerphases 11, 011005 (2016); doi: http://dx.doi.org/10.1116/1.4940703, published Online: January 2016

"Stability analysis of chemically modified mRNA using micropattern-based single-cell arrays"
Authors: Mehrije Ferizi, Carolin Leonhardt, Christian Meggle, Manish K. Aneja, Carsten Rudolph, Christian Plankac and J. O. Rädler.
Lab Chip, Advance Article, DOI: 10.1039/C5LC00749F-First published online 16 Jul 2015

"Contractility as a global regulator of cellular morphology, velocity, and directionality in low-adhesive fibrillary
micro-environments."

Authors: Schuster SL, Segerer FJ, Gegenfurtner FA, Kick K, Schreiber C, Albert M, Vollmar AM, Rädler J.O. and Zahler Stefan (B08).
Biomaterials. 2016 Sep;102:137-47. doi: 10.1016/j.biomaterials.2016.06.021. Epub 2016 Jun 14.

"Phenomenological approaches to collective behavior in epithelial cell migration"
Authors: Matthias Zorn, Anna-Kristina Marel, Felix J. Segerer and J. O. Rädler.
BBA, doi:10.1016/j.bbamcr.2015.05.021, available online 29 May 2015.

"Emergence and persistence of collective cell migration on small circular micropatterns"
Authors: Felix J. Segerer, Florian Thüroff, Alicia Piera Alberola, Erwin Frey (B02), and J. O. Rädler
Phys. Rev. Lett. 114, 228102, DOI: 10.1103/PhysRevLett.114.228102 – Published 2 June 2015

"Cell Motility on Polyethylene Glycol Block Copolymers Correlates to Fibronectin Surface Adsorption"
Authors: Peter J. F. Röttgermann, Samira Hertrich, Ida Berts, Max Albert, Felix J. Segerer, Jean-François Moulin,
Bert Nickel (A07) and J. O. Rädler.
Macromolecular Bioscience, Vol. 14, Issue 12, pages 1755–1763, DOI: 10.1002/mabi.201400246, Dec. 2014

"Alignment of cell division axes in directed epithelial cell migration"
Authors: Anna-Kristina Marel, Nils Podewitz, Matthias Zorn, J. O. Rädler and Jens Elgeti
New Journal of Physics, doi:10.1088/1367-2630/16/11/115005, Volume 16 November 2014

"The Actin Targeting Compound Chondramide Inhibits Breast Cancer Metastasis via Reduction of Cellular
Contractility"

Authors: Magdalena H. Menhofer, Rebekka Kubisch, Laura Schreiner, Matthias Zorn, Florian Foerster,
Rolf Mueller, J. O. Raedler, Ernst Wagner (B04), Angelika M. Vollmar, Stefan Zahler (B08).
PLOS ONE, Volume 9, Issue 11, e112542, November 2014

"Multi-Level Kinetic Model of mRNA Delivery via Transfection of Lipoplexes"
Authors: T. S. Ligon, C. Leonhardt and J. O. Rädler.
PLOS ONE, DOI: 10.1371/journal.pone.0107148, September 19, 2014

"Flow and Diffusion in Channel-Guided Cell Migration"
Authors: A.-K. Marel, M. Zorn, C. Klingner, R. Wedlich-Söldner, E. Frey (B02) and J. O. Rädler.
Biophysical Journal, DOI: doi.org/10.1016/j.bpj.2014.07.017, Vol 107, Issue 5, p1054–1064, Sept. 2, 2014

"Arraying Cell Cultures Using PEG-DMA Micromolding in Standard Culture Dishes."
Authors: A.-K. Marel, S. Rappl, A. Piera Alberola and J. O. Rädler.
Macromolecular Bioscience, March 4, 2013; DOI: 10.1002/mabi.201200400

"Nucleic acid nanostructures for biomedical applications"
Authors: David Smith, Verena Schüller, Christian Engst, J. O. Rädler and Tim Liedl (A06).
Future Medicine, London, January 2013, Vol. 8, No. 1, Pages 105-121 , DOI 10.2217

B02

"PAR protein activation-deactivation cycles stabilize long-axis polarization in C. elegans"
Authors: Raphaela Geßele, Jacob Halatek, Erwin Frey
bioRxiv., https://doi.org/10.1101/451880

"Rethinking pattern formation in reaction–diffusion systems"
Authors: J. Halatek & E. Frey
Nature Physicsvolume 14, pages507–514 (2018), https://doi.org/10.1038/s41567-017-0040-5

"Morphology and Motility of Cells on Soft Substrates"
Authors: Andriy Goychuk, David B. Brückner, Andrew W. Holle, Joachim P. Spatz, Chase P. Broedersz (B12), Erwin Frey
submitted for publication (2018)

"MinE conformational switching confers robustness on self-organized Min protein patterns"
Authors: Jonas Denk, Simon Kretschmer, Jacob Halatek, Caroline Hartl, Petra Schwille (A09) and Erwin Frey.
PNAS, 201719801; doi.org/10.1073/pnas.1719801115, April 16, 2018.

"Self-Organization principles of intracellular pattern formation"
Authors: J. Halatek, F. Brauns and E. Frey.
Biological Physics, DOI 10.1098/rstb.2017-0107, April 2018

"Protein Pattern Formation"
Authors: Erwin Frey, Jacob Halatek, Simon Kretschmer, Petra Schwille (A09)
book chapter to appear in Physics of Biological Membranes 2017, edited by Patricia Bassereau and Pierre Sens.

"Multistability and dynamic transitions of intracellular Min protein patterns"
Authors: Fabai Wu, Jacob Halatek, Matthias Reiter, Enzo Kingma, Erwin Frey & Cees Dekker.
Molecular Systems Biology, Volume 12, Issue 6, DOI: 10.15252/msb.20156724, June 2016

"Binary mixtures of particles with different diffusivities demix"
Authors: Simon N. Weber, Christoph A. Weber and Erwin Frey.
Phys. Rev. Lett. 116, 058301 – Published 4 February 2016

"Geometry-induced protein pattern formation"
Authors: Dominik Thalmeier, Jacob Halatek and E. Frey.
PNAS, 10.1073/pnas.1515191113-Published before print, January 6, 2016

"Emergence and persistence of collective cell migration on small circular micropatterns"
Authors: Felix J. Segerer, Florian Thüroff, Alicia Piera Alberola, Erwin Frey, and J. O. Rädler (B01).
Phys. Rev. Lett. 114, 228102, DOI: 10.1103/PhysRevLett.114.228102 – Published 2 June 2015

"Flow and Diffusion in Channel-Guided Cell Migration"
Authors: A.-K. Marel, M. Zorn, C. Klingner, R. Wedlich-Söldner, E. Frey and J. O. Rädler (B01).
Biophysical Journal, DOI: doi.org/10.1016/j.bpj.2014.07.017, Vol 107, Issue 5, p1054–1064, Sept. 2, 2014

"Effective two-dimensional model does not account for geometry sensing by self-organized proteins patterns - Supplementary document"

Authors: Jacob Halatek aund E. Frey.
PNAS, DOI:10.1073/pnas.1220971111, April 3, 2014

"GDI-Mediated Cell Polarization in Yeast Provides Precise Spatial and Temporal Control of Cdc42 Signalin"
Authors: B. Klünder, T. Freisinger, R. Wedlich-Söldner and E. Frey.
PLOS, DOI: 10.1371/journal.pcbi.1003396, December 2013

B03

"PAM: A Framework for Integrated Analysis of Imaging, Single-Molecule, and Ensemble Fluorescence Data"
Authors: Schrimpf W., Barth A., Hendrix J. and Don C. Lamb.
Biophys J. ;114(7):1518-1528. doi: 10.1016/j.bpj.2018.02.035, 10 Apr 2018

"Chemical Diversity in a Metal-Organic Framework Revealed by Fluorescence Lifetime Imaging"
Authors: W. Schrimpf, Juncong Jiang, Zhe Ji, Patrick Hirschle, Don C. Lamb, Omar M. Yaghi and Stefan Wuttke.
Nature C., published: april 2018

"A self-assembled nanoscale robotic arm controlled by electric fields"
Authors: Enzo Kopperger, Jonathan List, Sushi Madhira, Florian Rothfischer, Don C. Lamb and Friedrich C. Simmel (A02).
Science 359 (6373), 296-301. DOI: 10.1126/science.aao4284, 19 January 2018

"Directional Photonic Wire Mediated by Homo-Förster Resonance Energy Transfer on a DNA Origami Platform"
Authors: F. Nicoli, A. Barth, W Bae, F. Neukirchinger, A. H. Crevenna, D. C. Lamb, T. Liedl (A06)
ACS Nano doi: 10.1021/acsnano.7b05631 (2017), DOI: 10.1021/acsnano.7b05631

"Inhibition of the V-ATPase by Archazolid A - a new strategy to inhibit EMT"
Authors: Henriette Merk, Philipp Messer, Maximilian A. Ardelt, Don C. Lamb, Stefan Zahler (B08), Rolf Müller, Angelika M. Vollmar and Johanna Pachmayr
Molecular Cancer Therapeutics, doi: 10.1158/1535-7163.MCT-17-0129, Published OnlineFirst August 3, 2017

"Monitoring integrity and localization of modified single-stranded RNA oligonucleotides using ultrase."
Authors: Philipp Heissig, Waldemar schrimpf, Philipp Hadwiger, Ernst Wagner (B04) and Don C. Lamb.
PLOS, PONE-D-16-50271R1, Feb. 2017

"Investigation of the Co-Dependence of Morphology and Fluorescence Lifetime in a Metal-Organic Framework"
Authors: Waldemar Schrimpf , Giulia Ossato , Patrick Hirschle , Stefan Wuttke and Don C. Lamb.
small 2016, 12, No. 27, 3651–3657, DOI: 10.1002/smll.201600619, Epub 2016 May 12.

“Dual Antitumoral Potency of EG5 siRNA Nanoplexes Armed with Cytotoxic Bifunctional Glutamyl-Methotrexate Targeting Ligand.”
Authors: D.J. Lee, E. Kessel, D. Edinger, D. He, P. Klein, L. Voithenberg, D. C. Lamb, U. Lächelt, T. Lehto, E. Wagner.
Biomaterials, doi: 10.1016/j.biomaterials.2015.11.004, in press (2015).

"Live-cell observation of cytosolic HIV-1 assembly onset reveals RNA-interacting Gag oligomers"
Authors: Jelle Hendrix, Viola Baumgärtel, Waldemar Schrimpf, Sergey Ivanchenko, Michelle A. Digman, Enrico Gratton, Hans‑Georg Kräusslich, Barbara Müller and Don C. Lamb.
JCB Home, 210 (4): 629-646, doi: 10.1083/jcb.20150400, 17 August 2015

"The Lateral Membrane Organization and Dynamics of Myelin Proteins PLP and MBP Are Dictated by Distinct Galactolipids and the Extracellular Matrix"
Authors: Hande Ozgen, Waldemar Schrimpf, Jelle Hendrix, Jenny C. de Jonge, Don C. Lamb, Dick Hoekstra, Nicoletta Kahya and Wia Baron
PLOS One, DOI: 10.1371/journal.pone.0101834, July 8, 2014

"Native chemical ligation for conversion of sequence-defined oligomers
into targeted pDNA and siRNA carriers"

Authors: Can Yang Zhang, Petra Kos, Katharina Müller, Waldemar Schrimpf, Christina Troiber,
Ulrich Lächelt, Claudia Scholz, Don C. Lamb and Ernst Wagner (B04).
Journal of Controlled Release, pp42-50, doi:10.1016/j.jconrel.2014.02.015, April 28, 2014

"Pulsed Interleaved Excitation Fluctuation Imaging"
Authors: Jelle Hendrix, Waldemar Schrimpf, Matthias Höller and Don C. Lamb.
Biophysical Journal 105(4) 848-861, August 2013, DOI:10.1016/j.bpj.2013.05.059

B04

"A proteomic analysis of an in vitro knock-out of miR-200c"
Authors: Bojan Ljepoja, Jonathan García-Roman, Ann-Katrin Sommer, Thomas Fröhlich, Georg J. Arnold, Ernst Wagner and Andreas Roidl.
Scientific Reports, vol. 8, Article number: 6927, doi:10.1038/s41598-018-25240-y, Publ. online: 2 May 2018

"Systemic Delivery of Folate-PEG siRNA Lipopolyplexes with Enhanced Intracellular Stability for In Vivo Gene Silencing in Leukemia"
Authors: Lee DJ, Kessel E, Lehto T, Liu X, Yoshinaga N, Padari K, Chen YC, Kempter S, Uchida S, Rädler JO (B01), Pooga M, Sheu MT, Kataoka K, Wagner Ernst.
Bioconjug Chem.; 28(9):2393-2409, doi: 10.1021/acs.bioconjchem.7b00383, 2017 Sep 20

"Lipo-Oligomer Nanoformulations for Targeted Intracellular Protein Delivery"
Authors: Peng Zhang , Benjamin Steinborn, Ulrich Lächelt , Stefan Zahler (B08) and Ernst Wagner.
Biomacromolecules, 2017, 18 (8), pp 2509–2520, DOI: 10.1021/acs.biomac.7b00666,Publication Date (Web): June 26, 2017

"Monitoring integrity and localization of modified single-stranded RNA oligonucleotides using ultrase."
Authors: Philipp Heissig, Waldemar schrimpf, Philipp Hadwiger, Ernst Wagner and Don C. Lamb (B03).
PLOS, PONE-D-16-50271R1, Feb. 2017

"Targeted siRNA Delivery Using a Lipo-Oligoaminoamide Nanocore with an Influenza Peptide and Transferrin Shell."
Authors: Zhang W., Müller K., Kessel E., Reinhard S., He D., Klein PM, Höhn M., Rödl W., Kempter S. and Ernst Wagner.
Adv Healthcare Mater, doi: 10.1002/adhm.201600057, 2016 Apr 24.

"Ring-Shaped Microlanes and Chemical Barriers as a Platform for Probing Single-Cell Migration."
Authors: Christoph Schreiber, Felix J. Segerer, Ernst Wagner, Andreas Roidl & J. O. Rädler (B01).
Scientific Reports 6, Article number: 26858 (2016), doi:10.1038/srep26858, Published online:
31 May 2016

"DNA as Tunable Adaptor for siRNA Polyplex Stabilization and Functionalization"
Authors: Philipp Heissig, Philipp M. Klein, Philipp Hadwiger and Ernst Wagner.
Molecular Therapy—Nucleic Acids (2014) 5, e1; doi:10.1038/mtna.2016.6; 2016

Dual Antitumoral Potency of EG5 siRNA Nanoplexes Armed with Cytotoxic Bifunctional Glutamyl-Methotrexate Targeting Ligand.
Authors: D.J. Lee, E. Kessel, D. Edinger, D. He, P. Klein, L. Voithenberg, D. C. Lamb, U. Lächelt, T. Lehto, E. Wagner, Biomaterials, doi: 10.1016/j.biomaterials.2015.11.004, in press (2015).

"Tumor-targeted Delivery of Anti-microRNA for Cancer Therapy: pHLIP is Key"
Author: Ernst Wagner,
Angewandte Chemie, Int. Edition, Vol. 54, Is. 20, pag. 5824–5826, DOI: 10.1002/anie.201502146, 2015 May 11

"Twin disulfides as opportunity for improving stability and transfection efficiency of oligoaminoethane polyplexes"
Authors: Philipp M. Kleina, Katharina Müllera, Christina Gutmanna, Petra Kosa, Ana Krhac Levacica, Daniel Edingera, Miriam Höhna, Jean-Christophe Lerouxb, Marc A. Gauthierc and Ernst Wagner.
Journal of Control Release; 205:109-19. doi: 10.1016/j.jconrel.2014.12.035. Epub 2014 Dec 29, 2015 May 10

"The proto-oncogene KRAS is targeted by miR-200c"
Authors: Florian Kopp, Ernst Wagner and Andreas Roidl.
Oncotarget; 5(1):185-95, 2014 Jan 15

"Sequential Salinomycin Treatment Results in Resistance Formation through Clonal Selection of Epithelial-Like Tumor Cells"
Authors: Florian Kopp, Adam Hermawan, Prajakta Shirish Oak, Vijay Kumar Ulaganathan, Annika Herrmann, Nefertiti Elnikhely, Chitra Thakur, Zhiguang Xiao, Pjotr Knyazev, Beyhan Ataseven, Rajkumar Savai, Ernst Wagner and Andreas Roidl.
Transl Oncol.;2014 Dec; 7(6): 702–711.doi: 10.1016/j.tranon.2014.09.002, Published online 2014 Dec 10.

"The Actin Targeting Compound Chondramide Inhibits Breast Cancer Metastasis via Reduction of Cellular
Contractility"

Authors: Magdalena H. Menhofer, Rebekka Kubisch, Laura Schreiner, Matthias Zorn, Florian Foerster,
Rolf Mueller, Joachim O. Raedler (B01), Ernst Wagner, Angelika M. Vollmar, Stefan Zahler (B08)
PLOS ONE, Volume 9, Issue 11, e112542, November 2014

"Native chemical ligation for conversion of sequence-defined oligomers
into targeted pDNA and siRNA carriers"

Authors: Can Yang Zhang, Petra Kos, Katharina Müller, Waldemar Schrimpf, Christina Troiber,
Ulrich Lächelt, Claudia Scholz, Don C. Lamb (B03) and Ernst Wagner.
Journal of Controlled Release, pp42-50, doi:10.1016/j.jconrel.2014.02.015, April 28, 2014

"Salinomycin treatment reduces metastatic tumor burden by hampering cancer cell migration."
Authors: Florian Kopp, Adam Hermawan, Prajakta Shirish Oak, Annika Herrmann, Ernst Wagner and Andreas Roidl.
NCBI, Doi:10.1186/1476-4598-13-16, January 27, 2014

"Biomaterials in RNAi therapeutics: quo vadis?"
Author: Ernst Wagner.
Biomaterials Science, April 2013; DOI: 10.1039/c3bm60071h

"miR-200c sensitizes cancer cells to doxorubicin treatment by decreasing TrkB and Bmi expression."
Authors: Florian Kopp, Prajakta Oak, Ernst Wagner and Andreas Roidl.
PLoS ONE 7(11)2012: e50469. doi:10.1371/journal.pone.0050469

B05

"Synthesis and Functionalization of Ordered Large-Pore Mesoporous Silica Nanoparticles for Biomedical Applications"
Authors: Hsin-Yi Chiu, Heinrich Leonhardt and Thomas Bein.
Chemie Ingenieur Technik, DOI: 10.1002/cite.201700021, First published: 8 June 2017

"Genetically designed biomolecular capping system for mesoporous silica nanoparticles enables receptor-mediated cell uptake and controlled drug release"
Authors: Stefan Datz, Christian Argyo, Michael Johannes Gattner, Veronika Weiss, Korbinian Brunner, Johanna Bretzler, Constantin von Schirnding, Adriano A. Torrano, Fabio Spada, Milan Vrabel, Hanna Engelke, C Brauchle, Thomas Carell and Thomas Bein.
Nanoscale, DOI: 10.1039/C5NR08163G, 17 Feb 2016

"Immune response to functionalized mesoporous silica nanoparticles for targeted drug delivery."
Authors: S. Heidegger, Go, A. Schmidt, S. Niedermayer, C. Argyo, S. Endres, T. Bein and C. Bourquin.
Nanoscale 8 (2016) 938-948.

"A Selective Mucin/Methylcellulose Hybrid Gel with Tailored Mechanical Properties"
Authors: Constantin Nowald, Anja Penk, Hsin-Yi Chiu, Thomas Bein, Daniel Huster and Oliver Lieleg.
Macromolecular Bioscience (2016)

"Highly Efficient siRNA Delivery from Core-Shell Mesoporous Silica Nanoparticles with Multifunctional Polymer Caps."
Authors: K. Moeller, K. Muller, H. Engelke, C. Brauchle, E. Wagner and T. Bein.
Nanoscale (2015), DOI: 10.1039/C5NR06246B

Lipid Bilayer-Coated Curcumin-based Mesoporous Organosilica Nanoparticles for Cellular Delivery.
Authors: S. Datz, H. Engelke, C. v. Schirnding, L. Nguyen and T. Bein.
Microporous and Mesoporous Materials, doi:10.1016/j.micromeso.2015.12.006

A molecular nanocap activated by superparamagnetic heating for externally stimulated cargo release.
Authors: B. Ruehle, S. Datz, C. Argyo, T. Bein and J. I. Zink.
Chemical Communications (2015)

"Multifunctional polymer-capped mesoporous silica nanoparticles for pH-responsive targeted drug delivery."
Authors: S. Niedermayer, V. Weiss, A. Herrmann, A. Schmidt, S. Datz, K. Muller, E. Wagner, T. Bein and C. Brauchle.
Nanoscale 7 (2015) 7953-7964.

"Protease-Mediated Release of Chemotherapeutics from Mesoporous Silica Nanoparticles to ex Vivo Human and Mouse Lung Tumors."
S. H. van Rijt, D. A. Bölükbas, C. Argyo, S. Datz, M. Lindner, O. Eickelberg, M. Königshoff, T. Bein and S. Meiners.
ACS Nano 9 (2015) 2377-2389.

B07

"A Selective Mucin/Methylcellulose Hybrid Gel with Tailored Mechanical Properties"
Authors: Constantin Nowald, Anja Penk, Hsin-Yi Chiu, Thomas Bein, Daniel Huster and Oliver Lieleg.
Macromolecular Bioscience (2016)

"Enzymatically active biomimetic micropropellers for the penetration of mucin gels"
Authors: Deborah Walker, benjamin T. Käsdorf, Hyeon-Ho Jeong, Oliver Lieleg und Peer Fischer.
Science Advances, Vol. 1, no. 11, e1500501, DOI: 10.1126/sciadv.1500501, 11 Dec 2015

"Modulating Mucin Hydration and Lubrication by Deglycosilation and Polyethylene Glycol Binding"
Authors: Thomas Crouzier, Kathrin Boettcher, Anthony R. Geonnotti, Nicole L. Kavanaugh, Julie B. Hirsch, Katharina Ribbeck, and Oliver Lieleg
Advanced Materials Interfaces, DOI: 10.1002/admi.201500308, Published: September 25th, 2015

"A microfluidics approach to study the accumulation of molecules at basal lamina interfaces"
Authors: Fabienna Arends, Sabine Sellner, Philipp Seifert, Ulrich Gerland (A3), Markus Rehberg (B10) and Oliver Lieleg.
Lab Chip,15, 3326-3334, DOI: 10.1039/C5LC00561B, 02 Jul 2015

"The Biophysical Properties of Basal Lamina Gels Depend on the Biochemical Composition of the Gel"
Authors: Fabienna Arends, Constantin Nowald, Kerstin Pflieger, Kathrin Boettcher, Stefan Zahler (B08)
and Oliver Lieleg.
PLOS, DOI: 10.1371/journal.pone.0118090, Published: February 17, 2015

“Ion-Specific Effects Modulate the Diffusive Mobility of Colloids in an Extracellular Matrix Gel”
Authors: Fabienna Arends, Regina Baumgärtel and Oliver Lieleg.
Langmuir, December 9, 2013, DOI: 10.1021/la404016y

B08

 "Targeting the ER-mitochondria interface sensitizes leukemia cells towards cytostatics"
Authors: Koczian F., Nagło O., Vomacka J., Vick B., Servatius P., Zisis T., Hettich B., Kazmaier U., Sieber S.A., Jeremias I., Stefan Zahler and Braig S.
Haematologica: haematol.2018.197368; doi:10.3324/haematol.2018.197368, October 2018

"Transcriptional effects of actin-binding compounds: the cytoplasm sets the tone"
Authors: Florian A. Gegenfurtner, Themistoklis Zisis, Nader Al Danaf, Waldemar Schrimpf, Zane Kliesmete, Christoph Ziegenhain, Wolfgang Enard, Uli Kazmaier, Don C. Lamb, Angelika M. Vollmar and Stefan Zahler.
Cell Mol Life Sci., doi: 10.1007/s00018-018-2919-4, [Epub ahead of print], 2018 Sep 11.

"Zn2+-triggered self-assembly of Gonadorelin [6-D-Phe] to produce nanostructures and fibrils."
Authors: Yordanka Yordanova,Willem Vanderlinden, Raphael Stoll, Daniel Rüdiger, Andreas Tosstorff, Wolfgang Zaremba, Gerhard Winter, Stefan Zahler and Wolfgang Friess.
Sci Rep. 11280, Published online 2018 Jul 26, doi: [10.1038/s41598-018-29529-w], 2018; 8

"Inhibition of Cyclin-dependent Kinase 5 - a Novel Strategy to Improve Sorafenib Response in HCC Therapy."
Authors: Ardelt MA, Fröhlich T., Martini E., Müller M., Kanitz V., Atzberger C., Cantonati P., Meßner M., Posselt L., Lehr T., Wojtyniak JG., Ulrich M., Arnold GJ., König L., Parazzoli D., Stefan Zahler, Rothenfußer S., Mayr D., Gerbes A., Scita G., Vollmar AM. and Pachmayr J.
Hepatology, doi: 10.1002/hep.30190. [Epub ahead of print], 2018 Jul 23.

"Micropatterning as a tool to identify regulatory triggers and kinetics of actin-mediated endothelial mechanosensing."
Authors: Florian A. Gegenfurtner, Berenice Jahn, Helga Wagner, Christoph Ziegenhain, Wolfgang Enard, Ludwig Geistlinger, Joachim O. Rädler, Angelika M. Vollmar and Stefan Zahler.
Journal of Cell Science 2018, 131: jcs212886, doi: 10.1242/jcs.212886, Published 29 May 2018

"Targeting de novo lipogenesis as a novel approach in anti-cancer therapy."
Authors: Katharina Stoiber, Olga Nagło, Carla Pernpeintner, Siwei Zhang, Andreas Koeberle, Melanie Ulrich, Oliver Werz, Rolf Müller, Stefan Zahler, Theobald Lohmüller, Jochen Feldmann and Simone Braig.
British Journal of Cancer, 2018 Jan;118(1):43-51. doi: 10.1038/bjc.2017.374. Epub 2017 Nov 7.

"Persistent inhibition of pore-based cell migration by sub-toxic doses of miuraenamide, an actin filament stabilizer"
Authors: Christina Moser, Daniel Rüdiger, Florian Förster, Julia von Blume, Peng Yu, Bernhard Kuster, Uli Kazmaier, Angelika M. Vollmar and Stefan Zahler
Scientific Reports 7, Article number: 16407 (2017), doi:10.1038/s41598-017-16759-7, 27. Nov. 2017

"Inhibition of the V-ATPase by Archazolid A - a new strategy to inhibit EMT"
Authors: Henriette Merk, Philipp Messer, Maximilian A. Ardelt, Don C. Lamb (B03), Stefan Zahler, Rolf Müller, Angelika M. Vollmar and Johanna Pachmayr
Molecular Cancer Therapeutics, doi: 10.1158/1535-7163.MCT-17-0129, Published OnlineFirst August 3, 2017

"Lipo-Oligomer Nanoformulations for Targeted Intracellular Protein Delivery"
Authors: Peng Zhang , Benjamin Steinborn, Ulrich Lächelt , Stefan Zahler and Ernst Wagner (B04)
Biomacromolecules, 2017, 18 (8), pp 2509–2520, DOI: 10.1021/acs.biomac.7b00666,Publication Date (Web): June 26, 2017

"New View on Endothelial Cell Migration: Switching Modes of Migration Based on Matrix Composition."
Authors: Kerstin Kick, Katharina Nekolla, Markus Rehberg, Angelika M. Vollmar and Stefan Zahler.
Arterioscler Thromb Vasc Biol. 2016 Dec;36(12):2346-2357. Epub 2016 Oct 13.

"Photoswitchable Inhibitors of Microtubule Dynamics Optically Control Mitosis and Cell Death"
Authors: Borowiak M, Nahaboo W, Reynders M, Nekolla K, Jalinot P, Hasserodt J, Rehberg M, Delattre M, Zahler S, Vollmar A, Trauner D and Thorn-Seshold O (B09).
Cell, 162(2):403-411. doi: 10.1016/j.cell.2015.06.049. Epub 2015 Jul 16

"Contractility as a global regulator of cellular morphology, velocity, and directionality in low-adhesive fibrillary
micro-environments."

Authors: Schuster SL, Segerer FJ, Gegenfurtner FA, Kick K, Schreiber C, Albert M, Vollmar AM, Rädler J.O. (B01) and Zahler Stefan.
Biomaterials. 2016 Sep;102:137-47. doi: 10.1016/j.biomaterials.2016.06.021. Epub 2016 Jun 14.

"Influence of Surface Modifications on the Spatiotemporal Microdistribution of Quantum Dots In Vivo"
Authors: Katharina Nekolla, Kerstin Kick, Sabine Sellner, Karina Mildner, Stefan Zahler, Dagmar Zeuschner, Fritz Krombach and Markus Rehberg (B10).
Small, DOI: 10.1002/smll.201600071, Volume 12, Issue 19, pages 2641–2651, May 18, 2016

"Versatile method to generate multiple types of micropatterns"
Authors: Segerer FJ, Röttgermann PJ, Schuster S, Piera Alberola A, Zahler S and Rädler JO (B01).
Biointerphases 11, 011005 (2016); doi: http://dx.doi.org/10.1116/1.4940703, published Online: January 2016

"The Biophysical Properties of Basal Lamina Gels Depend on the Biochemical Composition of the Gel"
Authors: Fabienna Arends, Constantin Nowald, Kerstin Pflieger, Kathrin Boettcher, Stefan Zahler
and Oliver Lieleg (B07).
PLOS, DOI: 10.1371/journal.pone.0118090, Published: February 17, 2015

"The Actin Targeting Compound Chondramide Inhibits Breast Cancer Metastasis via Reduction of Cellular
Contractility"

Authors: Magdalena H. Menhofer, Rebekka Kubisch, Laura Schreiner, Matthias Zorn, Florian Foerster,
Rolf Mueller, J. O. Raedler (B01), Ernst Wagner (B04), Angelika M. Vollmar, Stefan Zahler.
PLOS ONE, Volume 9, Issue 11, e112542, November 2014

B09

"Photoswitchable Fatty Acids enable Optical Control of TRPV1"
Authors: Frank, J.A.; Mironi, M.; Moshourab, R.; Sumer M.; Lewin, G.R. and Trauner, D.
Nature Communications 6, Article number:7118, doi:10.1038/ncomms8118, Published 22 May 2015

“Photoswitchable diacylglycerols enable optical control of protein kinase C.”
Authors: James A. Frank, Dmytro A. Yushchenko, David J. Hodson, Noa Lipstein, Jatin Nagpal, Guy A Rutter, Jeong-Seop Rhee, Alexander Gottschalk, Nils Brose, Carsten Schultz & Dirk Trauner.
Nature Chemical Biology 12, 755–762 (2016), doi:10.1038/nchembio.2141

“Photoswitchable Inhibitors of Microtubule Dynamics Optically Control Mitosis and Cell Death.”
Malgorzata Borowiak, Wallis Nahaboo, Martin Reynders, Katharina Nekolla, Pierre Jalinot, Jens Hasserodt, Markus Rehberg, Marie Delattre, Stefan Zahler (B08), Angelika M. Vollmar, Dirk Trauner & Oliver Thorn-Seshold.
Cell 162 (2), 403–411 (2015), doi: 10.1016/j.cell.2015.06.049

“A Roadmap to Success in Photopharmacology.”
Johannes Broichhagen, James A. Frank & Dirk Trauner.
Accounts of Chemical Research 48 (7), 1947–1960 (2015), doi: 10.1021/acs.accounts.5b00129

B10

 "Intercellular Transport of Nanomaterials is Mediated by Membrane Nanotubes In Vivo."
Authors:Rehberg M, Nekolla K, Sellner S, Praetner M, Mildner K, Zeuschner D and Krombach F.
Small, doi: 10.1002/smll.201503606, 2016 Feb 8

"A microfluidics approach to study the accumulation of molecules at basal lamina interfaces"
Authors: Fabienna Arends, Sabine Sellner, Philipp Seifert, Ulrich Gerland (A3), Markus Rehberg and Oliver Lieleg (B7).
Lab Chip,15, 3326-3334, DOI: 10.1039/C5LC00561B, 02 Jul 2015

"DNA nanotubes as intracellular delivery vehicles in vivo"
Authors: Sabine Sellner, Samet Kocabey, Katharina Nekolla, Fritz Krombach, Tim Liedl (A06) and Markus Rehberg.
Biomaterials, Volume 53, Pages 453–463, doi:10.1016/j.biomaterials.2015.02.099, Published: June, 2015

"Label-free determination of hemodynamic parameters in the microcirculaton with third harmonic generation microscopy"
Authors: Dietzel S, Pircher J, Nekolla AK, Gull M, Brändli AW, Pohl U and Rehberg M..
PLoS One; 9(6):e99615. doi: 10.1371/journal.pone.0099615. eCollection 2014; 2014 Jun 16

B11

"Guiding 3D cell migration in deformed synthetic hydrogel microstructures"
Authors: Miriam Dietrich, Hugo Le Roy, David B. Brückner, Hanna Engelke, Roman Zantl, Joachim O. Rädler (B01) and Chase P. Broedersz (B12).
Royal Society of Chemistry, 2018

"Liposome-Coated Iron Fumarate Metal-Organic Framework Nanoparticles for Combination Therapy."
Authors: Bernhard Illes, Stefan Wuttke and Hanna Engelke.
Nanomaterials 2017, 7(11), 351; doi:10.3390/nano7110351, published: 26 October 2017

"Exosome-Coated Metal−Organic Framework Nanoparticles: An Efficient Drug Delivery Platform."
Authors: Bernhard Illes, Patrick Hirschle, Sabine Barnert, Valentina Cauda, Stefan Wuttke and Hanna Engelke.
Chem. Mater., DOI:10.1021/acs.chemmater.7b02358, published September 13, 2017

"Dendrimer‐Based Signal Amplification of Click‐Labelled DNA in Situ."
Authors: N., Raddaoui, S. Stazzoni, Dr. L. Möckl, B. Viverge, F. Geiger, H. Engelke, C. Bräuchle and Th. Carell (A05).
CHEM BIOCHEM, DOI: 10.1002/cbic.201700209, 22. June 2017

 B12

"Cell contraction induces long-ranged stress stiffening in the extracellular matrix"
Yu Long Han, Pierre Ronceray, Guoqiang Xu, Andrea Malandrino, Martin Lenz, Chase P. Broedersz, Ming Guo
PNAS 115 (16), 4075-4080 (2018). https://doi.org/10.1073/pnas.1722619115

"Guiding 3D cell migration in deformed synthetic hydrogel microstructures"
Authors: Miriam Dietrich, Hugo Le Roy, David B. Brückner, Hanna Engelke (B11), Roman Zantl, Joachim O. Rädler (B01) and Chase P. Broedersz.
Royal Society of Chemistry, 2018

"Morphology and Motility of Cells on Soft Substrates"
Authors: Andriy Goychuk, David B. Brückner, Andrew W. Holle, Joachim P. Spatz, Chase P. Broedersz, Erwin Frey (B02)
submitted for publication (2018)

"Physical limits to Biochemical Sensing in Disordered Fiber Networks "
Authors: Farzan Beroz, Louise M. Jawerth, Stefan Münster, David A. Weitz, Chase P. Broedersz and Ned S. Wingreen
Nature Communications 8, Article number: 16096 (2017), doi:10.1038/ncomms16096 NCOMMS-16-20780D, published online: 2017 July 18